Dumb fix for dumb issue. There might be more of the same still around, but fuck it, we're going for Ooze.

This reverts commit c31db61749.

poobrains/__init__.py

@@ -440,19 +440,31 @@ class Poobrain(flask.Flask):
         peewee.DoesNotExist: 404
     }
 
+    setup_funcs = None
     cronjobs = None
 
+    _setup_done = False
+
 
     def __init__(self, *args, **kwargs):
 
         if not 'root_path' in kwargs:
             kwargs['root_path'] = str(pathlib.Path('.').absolute()) #TODO: pathlib probably isn't really needed here
         
+        if 'DEBUG' in dir(config) and config.DEBUG:
+            # There's some shitty overriding going on based on FLASK_ENV.
+            # Set the env var to override the override and enforce what
+            # the config says.
+            os.environ['FLASK_ENV'] = 'development'
+        else:
+            os.environ['FLASK_ENV'] = 'production'
+
         super(Poobrain, self).__init__(*args, **kwargs)
 
+        self.setup_funcs = []
         self.cronjobs = []
 
-        @click.group(cls=flask.cli.FlaskGroup, create_app=lambda x: self)
+        @click.group(cls=flask.cli.FlaskGroup, create_app=lambda x=None: self)
         @click.option('--database', default=f"sqlite:///{project_name}.db")
         def cli(database):
             self.db = db_url.connect(database)
@@ -537,6 +549,14 @@ class Poobrain(flask.Flask):
         self.admin = Pooprint('admin', 'admin')
 
 
+    def full_dispatch_request(self):
+
+        if not self._setup_done:
+            self.run_setup()
+
+        return super().full_dispatch_request()
+
+
     def main(self):
         #self.cli(obj={})
         self.cli()
@@ -546,18 +566,28 @@ class Poobrain(flask.Flask):
         return True # autoescape everything
 
 
-    def try_trigger_before_first_request_functions(self):
+    def setup(self, f):
 
-        if not self.setup in self.before_first_request_funcs:
+        self.setup_funcs.append(f)
-            self.before_first_request_funcs.append(self.setup)
-        super(Poobrain, self).try_trigger_before_first_request_functions()
 
+        return f
 
-    def setup(self):
+    def run_setup(self):
+
+        """
+        Global runtime setup. Calls all @app.setup decorated functions
+        and registers site and admin blueprints.
+        Called by request_setup on first request.
+        """
+
+        for f in self.setup_funcs:
+            f()
 
         self.register_blueprint(self.site)
         self.register_blueprint(self.admin, url_prefix='/admin/')
 
+        self._setup_done = True
+
 
     @locked_cached_property
     def theme_paths(self):
@@ -612,7 +642,6 @@ class Poobrain(flask.Flask):
             except jinja2.exceptions.TemplateNotFound:
                 abort(404)
 
-
         else:
 
             paths = [os.path.join(path, resource) for path in app.theme_paths]
@@ -765,7 +794,7 @@ class Poobrain(flask.Flask):
                     except LookupError:
                         pass
 
-            raise LookupError("Failed generating URL for {cls.__name__}[{url_params.get('handle', None)}]-{mode}. No matching route found.")
+            raise LookupError(f"Failed generating URL for {cls.__name__}[{url_params.get('handle', None)}]-{mode}. No matching route found.")
 
     def get_related_view_url(self, cls, handle, related_field, add=None):
         

poobrains/analysis/data.py

@@ -576,6 +576,8 @@ class Dataset(EphemeralDataset, poobrains.commenting.Commentable):
 
     class Meta:
 
+        database = app.db
+
         modes = collections.OrderedDict([
             ('add', 'create'),
             ('teaser', 'read'),

poobrains/analysis/sources.py

@@ -82,7 +82,10 @@ class FileFieldset(poobrains.formapp.MultistateFieldset):
             ('geojson', "geojson"),
         ))
 
-        elif self.state == 'csv':
+        if self.state == 'csv':
+
+            self['consumer'].value = 'csv'
+            self['consumer'].readonly = True
 
             csv_options = self.session['csv_options']
 
@@ -102,13 +105,14 @@ class FileFieldset(poobrains.formapp.MultistateFieldset):
                     flash(f"Full error message: {e}", 'error')
             else:
 
+                self.session['csv_options'] = csv_options
                 table = poobrains.rendering.Table(title='CSV preview')
                 for idx, row in enumerate(reader):
                     if idx == 5:
                         break
                     table.append(*row)
 
-                self['table'] = poobrains.form.fields.RenderableWrapper(value=table)
+                self['table'] = poobrains.form.fields.RenderableWrapper(table)
                 self.approve = poobrains.form.Button('submit', label='Approve')
 
             escaped = {}
@@ -134,21 +138,46 @@ class FileFieldset(poobrains.formapp.MultistateFieldset):
 
     def process(self, submit):
 
+        if self.state == 'csv':
             if submit == 'change_csv_options':
                 unescape = lambda x: bytes(x, 'utf-8').decode('unicode_escape')
                 self.session['csv_options'] = {
-                'delimiter': unescape(self['delimiter'].value),
+                    'delimiter': unescape(self['delimiter'].value or ''),
                     'doublequote': self['doublequote'].value,
-                'escapechar': unescape(self['escapechar'].value),
+                    'escapechar': unescape(self['escapechar'].value or ''),
                     'lineterminator': unescape(self['lineterminator'].value),
-                'quotechar': unescape(self['quotechar'].value),
+                    'quotechar': unescape(self['quotechar'].value or ''),
                     'quoting': self['quoting'].value,
                     'skipinitialspace': self['skipinitialspace'].value,
                 }
 
                 flash("Changed CSV dialect options.")
+            else:
+                dialect = dialect_from_dict(self.session['csv_options'])
 
-        else: # means parent form wasn't submitting via cancel button – i.e. the "load" button was clicked
+                try:
+                    reader = csv.reader(io.StringIO(self.session['raw']), dialect)
+                except csv.Error as e:
+                    flash("Can't read file as CSV with supplied options.", 'error')
+                    if app.debug:
+                        flash(f"Full error message: {e}", 'error')
+
+                ds = self.owner()
+                ds['csv_col_fixme'] = {
+                        'title': "CSV Column",
+                        'description': 'FIXME: CSV has no type recognition, everything is float64',
+                        'dtype': 'float64',
+                        'color': None,
+                        'observations': {}
+                }
+
+                for idx, row in enumerate(reader):
+                    ds['csv_col_fixme']['observations'][idx] = util.float64.string_numpy(row[0]);
+
+                self.parent.session['other'] = ds.to_dict(whole=True)
+                self.parent.state = 'merge'
+
+        else: # submitted via load button with file upload
 
             consumer = self['consumer'].value
             raw = self['file'].value.read()
@@ -184,7 +213,7 @@ class FileFieldset(poobrains.formapp.MultistateFieldset):
 
             elif consumer == 'csv':
                 self.state = 'csv'
-                self.session['data_action_info']['csv_options'] = None
+                self.session['csv_options'] = None
 
             else:
                 flash("Unhandled", 'error')

poobrains/auth/__init__.py

@@ -39,7 +39,7 @@ def enforce_tls():
         ))
 
 
-@app.before_first_request
+@app.setup
 def admin_setup():
 
     if not app._got_first_request:

poobrains/cli/__init__.py

@@ -331,18 +331,13 @@ def add(storable):
 
             default = None
 
-            if field.default:
-
             if callable(field.default):
                 default = field.default()
             else:
                 default = field.default
 
-            elif field.type == types.DATETIME:
+            if field.null and default is None:
-                default = datetime.datetime.now()
+                default = '' # None interpreted as no default, '' treated as no value
-            
-            elif field.type == types.BOOL:
-                default = False
 
             value = click.prompt(field.name, type=field.type, default=default)
 

poobrains/form/fields.py

@@ -321,7 +321,7 @@ class BaseField(object, metaclass=poobrains.helpers.MetaCompatibility):
             return 'true' if value == True else 'false'
 
         elif isinstance(value, datetime.datetime):
-            return value.strftime('%Y-%m-%d %H:%M:%S')
+            return value.strftime('%Y-%m-%dT%H:%M:%S')
 
         elif inspect.isclass(value):
             return value.__name__
@@ -545,3 +545,8 @@ class File(Field):
 
     class Meta:
         abstract = True
+
+    def bind(self, value):
+        # simple passthrough because this is filled with object(s) from
+        # request.files and shouldn't be converted to a string.
+        self.value = value

poobrains/form/types.py

@@ -49,7 +49,7 @@ class DateTimeParamType(ParamType):
             return value # apparently we need this function to be idempotent.
 
         try:
-            return datetime.datetime.strptime(value, '%Y-%m-%d %H:%M:%S')
+            return datetime.datetime.strptime(value, '%Y-%m-%dT%H:%M:%S')
 
         except ValueError as e:
 
@@ -61,7 +61,7 @@ class DateTimeParamType(ParamType):
             else:
 
                 try:
-                    return datetime.datetime.strptime(value, '%Y-%m-%d %H:%M:%S.%f')
+                    return datetime.datetime.strptime(value, '%Y-%m-%dT%H:%M:%S.%f')
 
                 except ValueError as e:
 
@@ -71,7 +71,7 @@ class DateTimeParamType(ParamType):
                         self.fail("We dun goof'd, this field isn't working.")
 
                     else:
-                        self.fail(f"'{value}' is not a valid datetime. Expected format '%Y-%m-%d %H:%M:%S' or '%Y-%m-%d %H:%M:%S.%f'")
+                        self.fail(f"'{value}' is not a valid datetime. Expected format '%Y-%m-%dT%H:%M:%S' or '%Y-%m-%dT%H:%M:%S.%f'")
 
 DATETIME = DateTimeParamType()
 

poobrains/helpers.py

@@ -263,7 +263,7 @@ def pretty_bytes(bytecount):
 
         value /= 1024.0
 
-    return "{value:.2f} {unit}"
+    return f"{value:.2f} {unit}"
 
 
 def levenshtein_distance(s1, s2):
@@ -329,6 +329,7 @@ class FakeMetaOptions(object):
     modes = None
     permission_class = None
     schema = None  # needed by peewee.ModelBase.__new__
+    database = None # needed py peewee.ModelBase.__new__ at least from 3.15.0 on
     _additional_keys = None # needed by peewee.ModelBase.__new__
 
     def __init__(self):

poobrains/svg/__init__.py

@@ -71,7 +71,7 @@ class SVG(poobrains.auth.Protected):
             return poobrains.helpers.ThemedPassthrough(super(SVG, self).view(mode=mode, handle=handle))
 
 
-@app.before_first_request
+@app.setup
 def register_svg_raw():
     for cls in set(SVG.class_children()):
         rule = os.path.join("/svg/", cls.__name__.lower(), '<handle>', 'raw')

poobrains/testing.py

@@ -207,7 +207,7 @@ y
         if name.isupper():
             poobrains.app.config[name] = getattr(config, name)
 
-    client.get('/') # first request that triggers before_first_request to finish booting poobrains
+    client.get('/') # first request that triggers app.run_setup to finish booting poobrains
 
 
 def test_cli_minica(client):

poobrains/themes/default/colors.scss

@@ -1,8 +1,8 @@
-$color_background_dark: rgba(8,8,8, 0.8);
+$color_background_dark: rgba(8,8,8, 0.85);
-$color_background_light: rgba(255,255,255, 0.8);
+$color_background_light: rgba(255,255,255, 0.85);
-$color_highlight: rgba(0,128,255, 0.8);
+$color_highlight: rgba(0,128,255, 0.85);
 /*$color_highlight: transparentize(rebeccapurple, 20%);*/
-$color_danger: rgba(255, 0, 128, 0.8);
+$color_danger: rgba(255, 0, 128, 0.85);
 $color_font_dark: opacify($color_background_dark, 10%);
 $color_font_light: opacify($color_background_light, 10%);
 $color_background_form: opacify($color_background_light, -0.3);

poobrains/themes/default/main.scss

@@ -104,7 +104,8 @@
 @media (min-width: 56rem) {
 
     #logo-link {
-        display: flex !important;
+        display: block !important;
+        padding: 4rem 0;
     }
 
     body > header {
@@ -113,7 +114,6 @@
         .sticky { 
             width: 13rem;
             top: 11.5rem !important; /* 7.5rem logo height + 2rem space at top and bottom */
-            margin-bottom: 4rem; /* needed at least in firefox, to avoid vertical cutoff. should be the same as vertical padding for logo */
         }
     }
 
@@ -133,10 +133,10 @@ html {
     width: 100%;
     min-height: 100vh;
     /*overflow-y: scroll;*/ /* always show vertical scrollbar, viewport dependant widths stay the same */
-    background-image: url('/theme/bg.svg'), linear-gradient(45deg, lighten(opacify($color_background_dark, 100%), 15%), mix($color_highlight, $color_background_dark, 25%));
+    /*background-image: url('/theme/bg.svg'), linear-gradient(45deg, lighten(opacify($color_background_dark, 100%), 15%), mix($color_highlight, $color_background_dark, 25%));*/
+    background-image: url('/theme/bg.svg');
     /*background-image: url('/theme/pooscape-probablyold.svg'), linear-gradient(to bottom, opacify($color_background_dark, 0.2), darken(opacify($color_highlight, 0.2), 40%) 100%);*/
-    /*background-image: url('/theme/test.png');*/
+    background-color: opacify($color_background_dark, 100%);
-    background-color: #333;
     background-size: cover;
     background-position: center;
     background-attachment: fixed;
@@ -173,7 +173,6 @@ body {
         line-height: 3rem;
         display: inherit;
         background: $color_background_light;
-        backdrop-filter: blur($backdrop_blur);
         color: $color_font_dark;
         font-family: 'Orbitron', sans;
         font-weight: 100;
@@ -226,25 +225,18 @@ body {
         flex-basis: 15rem;
         flex-shrink: 1;
         flex-grow: 15;
-        display: flex;
         flex-direction: column;
         align-self: stretch;
         align-items: center;
-        justify-content: space-around;
         max-height: 100vh;
         box-sizing: border-box;
         padding: 1rem;
         z-index: 200;
         background-color: $color_background_dark;
-        backdrop-filter: blur($backdrop_blur);
-        /*border-left: 0.25rem solid;
-        border-right: 0.25rem solid;
-        border-bottom: 0.25rem solid;
-        border-color: $color_border;*/
         
         /*-webkit-clip-path: polygon(0 0, 0 calc(100% - 3rem), 50% 100%, 100% calc(100% - 3rem), 100% 0);*/
 
-        overflow: hidden;
+        overflow: auto;
 
         &:nth-child(2) { /* means dashbar is rendered */
             margin-top: 3rem;
@@ -320,6 +312,8 @@ body {
             }
 
             #logo {
+                display: block;
+                margin: 0 auto;
                 height: 7.5rem;
                 pointer-events: none;
             }
@@ -350,7 +344,6 @@ main {
         top: 0;
         padding: 2rem 1rem;
         background: $color_background_light;
-        backdrop-filter: blur($backdrop_blur);
         color: $color_font_dark;
         z-index: 110;
 
@@ -510,7 +503,6 @@ main {
         & article.content-type-tag.mode-full > .content > .description {
                 margin-top: 0.5rem;
                 background: $color_background_dark;
-                backdrop-filter: blur($backdrop_blur);
                 padding: 1rem;
         }
 
@@ -533,7 +525,6 @@ main {
         margin: 0.25rem 0;
         padding: 0.5rem;
         background: $color_background_dark;
-        backdrop-filter: blur($backdrop_blur);
 
         &, a {
             color: opacify($color_font_light, -0.3);
@@ -606,7 +597,6 @@ nav.menu {
         a {
             display: inline-block;
             background: $color_background_light;
-            backdrop-filter: blur($backdrop_blur);
             width: 2rem;
             height: 2rem;
             line-height: 2.3rem; /* +0.3rem based on fiddling around in ff inspector */
@@ -642,7 +632,6 @@ nav.menu {
             background-color: $color_background_dark;
             background-size: 32px 32px;
             background-position: 4px 4px;
-            backdrop-filter: blur($backdrop_blur);
             font-weight: 400;
 
             transition: background 0.3s linear, color 0.3s linear;
@@ -677,7 +666,6 @@ ul {
             & > div.comment {
                 /* comments have transparent bg by default, avoid breaking the design when showing them outside of an article */
                 background: $color_background_dark;
-                backdrop-filter: blur($backdrop_blur);
                 padding: 1rem;
             }
         }
@@ -827,7 +815,6 @@ form {
     & > header {
 
         background: $color_background_light;
-        backdrop-filter: blur($backdrop_blur);
         padding: 0.5rem 1rem;
 
         h2 {
@@ -856,7 +843,6 @@ form {
 
     & > div.content {
         background: $color_background_dark;
-        backdrop-filter: blur($backdrop_blur);
     }
 }
 
@@ -906,7 +892,6 @@ article {
 
         padding: 0.25rem 1rem;
         background: $color_background_light;
-        backdrop-filter: blur($backdrop_blur);
         color: $color_font_dark;
 
         &::after {

poobrains/themes/default/svg.scss

@@ -69,14 +69,14 @@ svg#hexascroll {
             animation: decorotion 5s linear infinite;
 
             use {
-                /*animation: scroll 10s linear infinite; /* apply the animation to every hexagon instead of the g so we don't get perspective fuckups */*/
+                animation: scroll 10s linear infinite; /* apply the animation to every hexagon instead of the g so we don't get perspective fuckups */
             }
         }
     }
 
     use {
         fill: opacify($color_background_dark, -0.2);
-        stroke: $color_background_light;
+        stroke: darken($color_highlight, 30%);
         stroke-width: 2;
 
         &.hexagon {

poobrains/themes/default/svg/map-inline.jinja

@@ -6,7 +6,7 @@
     width="100%"
     height="100%"
 
-    viewBox="0 0 100 100"
+    viewBox="0 0 100% 100%"
     preserveAspectRatio="xMinYMin meet"
     id="{{ content.dataset.ref_id }}"
     class="plot {{ content.__class__.__name__.lower()}}"

poobrains/upload/__init__.py

@@ -57,7 +57,7 @@ class UploadForm(poobrains.auth.AutoForm):
         upload_file = self.fields['upload'].value
         filename = self.fields['filename'].value
 
-        if filename is not '':
+        if filename != '':
 
             file_path = os.path.join(self.instance.path, filename)